Processed file: input.fasta
Number of sequences: 16
Alignment assumed to be: DNA
New number of positions: 821 (selected positions are underlined in blue)
10 20 30 40 50 60
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S ------------------------------------------------------------
Aquifex_aeolicu TCCCTGAAGAGTTTGATCCTGGCTCAGCGCGAACGCTGGCGGCGTGCCTAACACATGCAA
Vibrio_Harveyi ---------------TTCCGCAACAAAAATTAAAAGACGCGGCA--CTCCAAAC------
Pseudoalteromon --------------------------------------------------GGCCCTAAAC
Shewanella_Alga ----ATTAGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACAC------
Streptomyces_sp ------------------------------------------------------------
Micromonospora ------------------------------------------------------------
Tepidibacter_Fo ------------------------------------------------------------
Thermoactinomyc ----ATTAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATAC------
Laceyella_Sacch ------------------------------------------------------------
Virgibacillus_S ------------------------------GGGCATTGGGGGCGGGCTATAATGCAGTCG
Exiguobacterium ----------------------------------------GCCGTTCTGAACCCTTCGGG
Cytobacillus_Ko ------------------------------------------------------------
Bacillus_sp_CTA ------------------------------------------------------------
Bacillus_Cereus ------------------------------------------------------------
Bacillus_Paramy ----------------------------------------------------TGCTAATA
70 80 90 100 110 120
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S ------------------------------------------------------------
Aquifex_aeolicu GTCGTGCGCAGGGTCGGCCCCTTTTGGGGCCGGCCG----------CTGAGCGGCAAACG
Vibrio_Harveyi GCCAAAGGGAGGGAAAGAGTATTTTAACCCTTCTGGAATATTAA--GAGGGTTACGGGCG
Pseudoalteromon ATTACAATGCGGGGGGTAACTTTTTCAGCTTGTAGGA------------GATGGCCAGGG
Shewanella_Alga -ATGCAAGTCGAGCGGTAACATTTCAAAAGCTTGCTTTTGAAGATGACGAGCGGCGGACG
Streptomyces_sp ------------------------------------------------------------
Micromonospora ------------------------------------------------------------
Tepidibacter_Fo ---------TAAGAGCTTGCTCTTTGATTCT------------------AGCGGCGGACG
Thermoactinomyc -ATGCAAGTCGAGCGGGAGAATCATCCTTCGGGATGAGGAT------CCAGCGGCGAACG
Laceyella_Sacch -------------------------------------TCCGGAC--CCTAGCGGCGAACG
Virgibacillus_S AGCGCGGGAGCAGGCAGATCCTCTTCGGAGGTGACGCCTGTGGA--ACGAGCGGCGGACG
Exiguobacterium GGGACGACGGCGGA--------------------------------ATGAGCGGCGGACG
Cytobacillus_Ko ------------------------------------------------------------
Bacillus_sp_CTA ------------------------------------------------------------
Bacillus_Cereus --------------------------------------------------------GACG
Bacillus_Paramy CATGCAAGTCGAGCGAATGGATTAAGAGCTTGCTCTTATGAAGT----TAGCGGCGGACG
130 140 150 160 170 180
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S --TG------AGTAATG--CCTAAG-AGTCTGCCTGGTAGTGGGGGACATGGTT-GCGAA
Aquifex_aeolicu GGTG------AGTAACA--CGTGGGTAACCTACCCCCAGGAGGGGGATAACCCC-GGGAA
Vibrio_Harveyi GGGCGGGGGTAGAATTC--CTTTGGAAATTTGCCCTTGTGTGGGGGATAACCCT-GGGAA
Pseudoalteromon GGCGACGCGGTGTAATATTCTTTGGGAACCTCCCCTTGAGGTGGGGGCAACCCCTTGGAA
Shewanella_Alga GGTG------AGTAATG--CCTGGG-AATTTGCCCATTTGTGGGGGATAACAGT-TGGAA
Streptomyces_sp ------------------------------------------TGGGACAAGCCC-TGGAA
Micromonospora ------------------------------------------------------------
Tepidibacter_Fo GGTG------AGTAACG--CGTGGGTAACCTGCCCTATACACATGGATAACATA-CCGAA
Thermoactinomyc GGTG------AGTAACA--CGTGGGCAACCTGCCCGCAAGACCGGGATAACTCC-GGGAA
Laceyella_Sacch GGTG------AGTAACA--CGTGGGCAACCTGCCCGTAAGACTGGGATAACTCC-AGGAA
Virgibacillus_S GGTG------AGTAACA--CGTGGGCAACCTGCCTGTAAGATTGGGATAACCCC-GGGAA
Exiguobacterium GGTG------AGTAACA--CGTAAAGAACCTGCCCATAGGTCTGGGATAACCAC-GAGAA
Cytobacillus_Ko --------------------------AACCTGCCTGTAAGACTGGGATAACTCC-GGGAA
Bacillus_sp_CTA --------------ACA--CGTGGGCAACCTGCCTGTAAGACTGGGATAACTCC-GGGAA
Bacillus_Cereus GGTG------AGTAACA--CGTGGGTAACCTGCCCATAAGACTGGGATAACTCC-GGGAA
Bacillus_Paramy GGTG------AGTAACA--CGTGGGTAACCTGCCCATAAGACTGGGATAACTCC-GGGAA
190 200 210 220 230 240
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S AGGGACGTTAATCCCGGATACCTGCTAT----------------AGGAGAAAGTGGGGGA
Aquifex_aeolicu ACCGGGGCTAATACCCCATAATGCCACCCGCCACTAAGGCGCGGTGGCCAAA----GGGG
Vibrio_Harveyi ACGGTGGCTAATTCCGCTTAAACCCTTC----------------GGGTCAAAAGGGGGAA
Pseudoalteromon ACGGTGGTTTAATCCGCCTATAGTTTTC----------------GGACCAAA----GGGG
Shewanella_Alga ACGACTGCTAATACCGCATACGCCCTAC----------------GGGGGAAAGCAGGGGA
Streptomyces_sp ACGGGGTCTAATACCGGATATGAGTTCC-TACCGCATGGTGGGGGCTGGAAAGC------
Micromonospora -CCGGGGCTAATACCGAATATGACCTGG-CCTCGCATGAGGTTTGGTGGAAAGT------
Tepidibacter_Fo AGGTATGCTAATACAAGATAATACTAAGATGAGGCATCTTATCTTAGTCAAAGC------
Thermoactinomyc ACCGGGGCTAATACCGGATAGGCCATTT-CCCCGCATGGGGAAATGGGGAAA----GGCG
Laceyella_Sacch ACCGGTGCTAATACCAGATAATCTCCTT-CTCCGCATGGAGAAAGAGTAAAA----GGCT
Virgibacillus_S ACCGGGGCTAATACCGGATAATACTTTT-CGTTGCATAACGAGAAGTTGAAA----GGCG
Exiguobacterium ATCGGGGCTAATACCGGATGTGTCATCG-GACCGCATGGTCCGCTGATGAAA----GGCG
Cytobacillus_Ko ACCGGGGCTAATACCGGATAATATCTAT-TTATACATATAATTAGATTGAAA----GATG
Bacillus_sp_CTA ACCGGAGCTAATACCGGATAACATTTTC-TCTTGCATAAGAGAAAATTGAAA----GATG
Bacillus_Cereus ACCGGGGCTAATACCGGATAACATTTTG-AACCGCATGGTTCGAAATTGAAA----GGCG
Bacillus_Paramy ACCGGGGCTAATACCGGATAACATTTTG-AACTGCATGGTTCGAAATTGAAA----GGCG
#################
250 260 270 280 290 300
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S TCTTCTTA-----------CCTCACGCTATCTTATGAG-GCTAGGTTGGATTGTCTATTT
Aquifex_aeolicu GCCTCTGGCCTTCGGCCACGCTCCCGCCTGGGGATGGG-CCCGCGGCCCATCAGGTAGTT
Vibrio_Harveyi CTTTGGGC-----------CCTCCCGGTTCAAGAATAGCCCTAGGTGGGATTAGCTAGTT
Pseudoalteromon GCTTCG-------------GCCTTCGCCTTTAGATTGGCCCCAAGTGGAATTAGCTAGTT
Shewanella_Alga CCTTCGGG-----------CCTTGCGCTGATGGATAAG-CCCAGGTGGGATTAGCTAGTA
Streptomyces_sp -------------------TCCGGCGGTGCAGGATGAG-CCCGCGGCCTATCAGCTTGTT
Micromonospora -------------------TTT-TCGGCCTGGGATGGG-CTCGCGGCCTATCAGCTTGTT
Tepidibacter_Fo -------------------GTTAGCGGTATAGGATGGA-CCCGCGTCCCATTAGCTAGTT
Thermoactinomyc GCTTCG-------------GCTGTCACTTGCGGATGGG-CCCGCGGCGCATTAGCTGGTT
Laceyella_Sacch -------------------TCGGCCACTTACGGATGGG-CCCGCGGCGCATTAGCTAGTT
Virgibacillus_S GCTTTT-A-----------GCTGTCACTTACAGATGGG-CCCGCGGCGCATTAGCTAGTT
Exiguobacterium CTCC---------------GGCGTCGCCCATGGATGGC-TTTGCGGTGCATTAGCTAGTT
Cytobacillus_Ko GTTCT--------------GCTATCACTTACAGATGGG-CCCGCGGCGCATTAGCTAGTT
Bacillus_sp_CTA GTTTCG-------------GCTATCACTTACAGATGGG-CCCGCGGTGCATTAGCTAGTT
Bacillus_Cereus GCTTCG-------------GCTGTCACTTATGGATGGA-CCCGCGTCGCATTAGCTAGTT
Bacillus_Paramy GCTTCG-------------GCTGTCACTTATGGATGGA-CCCGCGTCGCATTAGCTAGTT
############## #####################
310 320 330 340 350 360
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S GGTGAGGTAAAGGCTCGCC-AAGGCTACTATCCGAAGCTGGGCTGAAAGGATGATCCGAT
Aquifex_aeolicu GGTGGGGTAACGGCCCACC-AAGCCTATGACGGGTAGCCGGCCTGAGAGGGTGGCCGGCC
Vibrio_Harveyi GGTGAGGTAATGGCTCACC-AAGGCGACGATCCCTAGCTGGTTTGAGAGGATGATCAGCC
Pseudoalteromon GGTGAGGTAACGGCTCCCCCAAGGCAACGATCCCTAGCTGGTTTGAGAGGATGATCAGCC
Shewanella_Alga GGTGAGGTAAAGGCTCACC-TAGGCGACGATCCCTAGCTGGTCTGAGAGGATGATCAGCC
Streptomyces_sp GGTGAGGTAATGGCTCACC-AAGGCGACGACGGGTAGCCGGCCTGAGAGGGCGACCGGCC
Micromonospora GGTGGGGTGATGGCCTACC-AAGGCGACGACGGGTAGCCGGCCTGAGAGGGCGACCGGCC
Tepidibacter_Fo GGTGAGGTAACGGCTCACC-AAGGCCACGATGGGTAGCCGACCTGAGAGGGTGATCGGCC
Thermoactinomyc GGTGAGGTAACGGCTCACC-AAGGCGACGATGCGTAGCCGACCTGAGAGGGTGATCGGCC
Laceyella_Sacch GGTGGGGTAACGGCTCACC-AAGGCGACGATGCGTAGCCGACCTGAGAGGGTGATCGGCC
Virgibacillus_S GGTAAGGTAACGGCTTACC-AAGGCGACGATGCGTAGCCGACCTGAGAGGGTGATCGGCC
Exiguobacterium GGTGGGGTAACGGCCCACC-AAGGCGACGATGCATAGCCGACCTGAGAGGGTGATCGGCC
Cytobacillus_Ko GGTGAGGTAACGGCTCACC-AAGGCGACGATGCGTAGCCGACCTGAGAGGGTGATCGGCC
Bacillus_sp_CTA GGTGAGGTAACGGCTCACC-AAGGCAACGATGCATAGCCGACCTGAGAGGGTGATCGGCC
Bacillus_Cereus GGTGAGGTAACGGCTCACC-AAGGCAACGATGCGTAGCCGACCTGAGAGGGTGATCGGCC
Bacillus_Paramy GGTGAGGTAACGGCTCACC-AAGGCAACGATGCGTAGCCGACCTGAGAGGGTGATCGGCC
################### ########################################
370 380 390 400 410 420
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S GCACTGGCAATGAGACAGGGTCCTCACTCCTACTGGAGGTGAGACTGGGGAATATTGCAC
Aquifex_aeolicu ACAGCGGGACTGAGACACGGCCCGCACCCCTACGGGGGGCAGCAGTGGGGAATCGTGGGC
Vibrio_Harveyi ACACTGGAATTGAGACCCGGTCCAGACTCCTTCGGGAGGCAGCAGTGGGGAATATTGCCC
Pseudoalteromon CCCCTGGAACTGAGACCCGGTCCAGATTCCTACGGGAGGCAGCAGTGGGGAATATTGCAC
Shewanella_Alga ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCAC
Streptomyces_sp ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCAC
Micromonospora ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCAC
Tepidibacter_Fo ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCAC
Thermoactinomyc ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATTTTCCGC
Laceyella_Sacch ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATTTTCCGC
Virgibacillus_S ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGC
Exiguobacterium ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCAC
Cytobacillus_Ko ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGC
Bacillus_sp_CTA ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGC
Bacillus_Cereus ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGC
Bacillus_Paramy ACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGC
############################################################
430 440 450 460 470 480
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S AATGGGGGAAAGCCTGATCCATCCTTGCCGCGGGTGTAAAGAATGACTTCGGATTGCCAA
Aquifex_aeolicu AATGGGCGAAAGCCTGACCCCGCGACGCCGCGTGGGGGATGAAGCCCTGCGGGGTGTAAA
Vibrio_Harveyi AATGGGCGCAAGCCTGATGCAGCCATCCCGCGTGGTTGAAGAAGGCCTTCGGGTTGTAAA
Pseudoalteromon AATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAA
Shewanella_Alga AATGGGGGAAACCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAA
Streptomyces_sp AATGGGCGCAAGCCTGATGCAGCGACGCCGCGTGAGGGATGACGGCCTTCGGGTTGTAAA
Micromonospora AATGGGCGGAAGCCTGATGCAGCGACGCCGCGTGAGGGATGACGGCCTTCGGGTTGTAAA
Tepidibacter_Fo AATGGGGGAAACCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAA
Thermoactinomyc AATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGTGAGGACGGCCTTCGGGTTGTAAA
Laceyella_Sacch AATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAGTGATGACGGCCTTCGGGTTGTAAA
Virgibacillus_S AATGGACGAAAGTCTGACGGAGCAACGCCGCGTGAGTGATGAAGGTTTTCGGATCGTAAA
Exiguobacterium AATGGACGAAAGTCTGATGGAGCAACGCCGCGTGAACGATGAAGGCTTTCGGGTCGTAAA
Cytobacillus_Ko AATGGACGAAAGTCTGACGGAGCAACGCCGCGTGAGTGATGAAGGTTTTCGGATCGTAAA
Bacillus_sp_CTA AATGGACGAAAGTCTGACGGAGCAACGCCGCGTGAGTGATGAAGGCTTTCGGGTCGTAAA
Bacillus_Cereus AATGGACGAAAGTCTGACGGAGCAACGCCGCGTGAGTGATGAAGGCTTTCGGGTCGTAAA
Bacillus_Paramy AATGGACGAAAGTCTGACGGAGCAACGCCGCGTGAGTGATGAAGGCTTTCGGGTCGTAAA
############################################################
490 500 510 520 530 540
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S GCACTTTAAGTTGGTTTTAAGGTCAGTAAGTTC--TACCTTGCGGTT--TAGACGTTGCC
Aquifex_aeolicu CCCCTGTCGGGGGGGACGATGCGGACACGGGTTAATAGCCCGTGTCC--GTGACGGTACC
Vibrio_Harveyi GCACTTTCAGTCGTGAGGAAGGTAGTGTAGT-TAATAGCTGCATTAT--TTGACGTTAGC
Pseudoalteromon GCACTTTCAGTCAGGAGGAAAGGTTAGTAGT-TAATACCTGCTAGCT--GTGACGTTACT
Shewanella_Alga GCACTTTCAGCGAGGAGGAAAGGGTGTAAGT-TAATACCTTACATCT--GTGACGTTACT
Streptomyces_sp CCTCTTTCAGCAGGGAAGAAGCGAAA-----------------------GTGACGGTACC
Micromonospora CCTCTTTCAGCAGGGACGAAGCGTAA-----------------------GTGACGGTACC
Tepidibacter_Fo GCTCTGTCCTAAGGGAAGAATA---------------------------CTGACGGTACC
Thermoactinomyc ACTCTGTTCTTGAGGAAGAATTCCTTCCAGGCGAACAG--CCTGGAAGGTTGACGGTACT
Laceyella_Sacch ACTCTGTTCTGAAGGAAGAAGTT--------------------------CTGACGGTACT
Virgibacillus_S ACTCTGTTGTCAGGGAAGAACAAGTGCCGTTCGAATAG--GGCGGCACCTTGACGGTACC
Exiguobacterium GTTCTGTTGTAAGGGGAGAACAAGTGCCG---CAGGCAATGGCGGCACCTTGACGGTACC
Cytobacillus_Ko ACTCTGTTGTTAGGGAAGAACAAGTACCG---GAGTAACTGCCGGTACCTTGACGGTACC
Bacillus_sp_CTA ACTCTGTTGTTAGGGAAGAACAAGTACAA---GAGTAACTGCTTGTACCTTGACGGTACC
Bacillus_Cereus ACTCTGTTGTTAGGGAAGAACAAGTGCTAGTTGAATAA--GCTGGCACCTTGACGGTACC
Bacillus_Paramy ACTCTGTTGTTAGGGAAGAACAAGTGCTAGTTGAATAA--GCTGGCACCTTGACGGTACC
#################### ##########
550 560 570 580 590 600
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S AACAGAATAAGCACCGGCTAACTTCGTGCCTG-ACCCGCGGTCATACCTAAGTAGCTGGC
Aquifex_aeolicu CCCAGAGGAAGGGACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTCCCAAGC
Vibrio_Harveyi GACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGC
Pseudoalteromon GACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGC
Shewanella_Alga CGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGC
Streptomyces_sp TGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGCAAGC
Micromonospora TGCAGAAGAAGCGCCGGCCAACTACGTGCCAGCAGCCGCGGTAAGACGTAGGGCGCGAGC
Tepidibacter_Fo TTAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC
Thermoactinomyc CAAGGAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCGAGC
Laceyella_Sacch TCAGGAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCGAGC
Virgibacillus_S TGACCAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGC
Exiguobacterium TTGCGAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGC
Cytobacillus_Ko TAACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGC
Bacillus_sp_CTA TAACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGC
Bacillus_Cereus TAACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGC
Bacillus_Paramy TAACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGC
################################ ###########################
610 620 630 640 650 660
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S GTTAATCGCAATTACTGGTAGGAAAGAGCGCTTATGTGGATCTATTGGTTGGATGTGAAA
Aquifex_aeolicu GTTGCGCGAAGTCACTGGGCGTAAAGCGTCCGCAGCCGGTCGGGTAAGCGGGATGTCAAA
Vibrio_Harveyi GTTAATCGGAATTACTGGGCGTAAAGCGCATGCAGGTGGTTTGTTAAGTCAGATGTGAAA
Pseudoalteromon GTTAATCGGAATTACTGGGCGTAAAGCGTACGCAGGCGGTTTGTTAAGCGAGATGTGAAA
Shewanella_Alga GTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGTTAAGCGAGATGTGAAA
Streptomyces_sp GTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGCTTGTCGCGTCGGTTGTGAAA
Micromonospora GTTGTCCGGATTTATTGGGCGTAAAGAGCTCGTAGGCGGCTTGTCGCGTCGACTGTGAAA
Tepidibacter_Fo GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGCGGCCCTTCAAGTCAGAGGTGAAA
Thermoactinomyc GTTATCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGCTGATTAAGTCAGGTGTGAAA
Laceyella_Sacch GTTATCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTCAGGTGTGAAA
Virgibacillus_S GTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCCTTTAAGTCTGATGTGAAA
Exiguobacterium GTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGCCTCTTAAGTCTGATGTGAAA
Cytobacillus_Ko GTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTTCCTTAAGTCTGATGTGAAA
Bacillus_sp_CTA GTTATCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTTTCTTAAGTCTGATGTGAAA
Bacillus_Cereus GTTATCCGGAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTCTTAAGTCTGATGTGAAA
Bacillus_Paramy GTTATCCGGAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTCTTAAGTCTGATGTGAAA
############################################################
670 680 690 700 710 720
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S CCCCCGGGGTCCTTCTGGTAACAGCTTCCAGCACTGGCGATATCCATGATGGGACATTGT
Aquifex_aeolicu GCCCACGGCTCAACCGTGGACCGGCATCCCGAACTGCCC---------------------
Vibrio_Harveyi GCCCGGGGCTCAACCTCGGAATAGCATTTGAAACTGGCA---------------------
Pseudoalteromon GCCCCGGGCTTAACCTGGGAACTGCATTTCGAACTGGCA---------------------
Shewanella_Alga GCCCCGGGCTCAACCTGGGAACCGCATTTCGAACTGGCA---------------------
Streptomyces_sp GCCCGGGGCTTAACCCCGGGTCTGCAGTCGATACGGGCA---------------------
Micromonospora ACCCGCAGCTCAACTGCGGGCCTGCAGTCGATACGGGCA---------------------
Tepidibacter_Fo GGCTACGGCTCAACCGTAGTA-AGCCTTTGAAACTGTAG---------------------
Thermoactinomyc GGCTGCGGCTCAACCGCAGAGCGGCACCTGAAACTGGTC---------------------
Laceyella_Sacch GGCTGCGGCTCAACCGCAGAGCGGCACCTGAAACTGGAT---------------------
Virgibacillus_S GCCCACGGCTTAACCGTGGAGGGCCATTGGAAACTGGAG---------------------
Exiguobacterium GCCCCCGGCTCAACCGGGGAGGGCCATCGGAAACTGGGA---------------------
Cytobacillus_Ko GCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGGG---------------------
Bacillus_sp_CTA GCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGGG---------------------
Bacillus_Cereus GCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGGA---------------------
Bacillus_Paramy GCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGGA---------------------
#################### ###############
730 740 750 760 770 780
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S GGTGTAATTGACTGGGTTGCGGAGGAATACATTGAAATTCCACGGAACACGATTGAATGA
Aquifex_aeolicu ---------GACTTGAGGCACGCCCGGGCAGGCGGAATTCCCGGGGTAGCGGTGAAATGC
Vibrio_Harveyi ---------GACTAGAGTACTGTAGAGGGGGGTAGAATTTCAGGTGTAGCGGTGAAATGC
Pseudoalteromon ---------AACTAGAGTGTGATAGAGGGTGGTAGAATTTCAGGTGTAGCGGTGAAATGC
Shewanella_Alga ---------AACTAGAGTCTTGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGC
Streptomyces_sp ---------GGCTAGAGTTCGGTAGGGGAGATCGGAATTCCTGGTGTAGCGGTGAAATGC
Micromonospora ---------GGCTAGAGTTCGGTAGGGGAGACTGGAATTCCTGGTGTAGCGGTGAAATGC
Tepidibacter_Fo ---------GGCTTGAGTGCAGGAGAGGAGAGTGGAATTCCCAGTGTAGCGGTGAAATGC
Thermoactinomyc ---------AGCTTGAGTGCAGGAGAGGGGAGCGGAATTCCCGGTGTAGCGGTGGAATGC
Laceyella_Sacch ---------GACTTGAGTGCAGGAGAGGAGAGCGGAATTCCCGGTGTAGCGGTGGAATGC
Virgibacillus_S ---------GACTTGAGTACAGAAGAGGAGAGTGGAATTCCACGTGTAGCGGTGAAATGC
Exiguobacterium ---------GGCTTGAGTATAGGAGAGAAGAGTGGAATTCCACGTGTAGCGGTGAAATGC
Cytobacillus_Ko ---------AACTTGAGTGCAGAAGAGGAAAGTGGAATTCCAAGTGTAGCGGTGAAATGC
Bacillus_sp_CTA ---------AACTTGAGTGCAGAAGAGAAAAGCGGAATTCCACGTGTAGCGGTGAAATGC
Bacillus_Cereus ---------GACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGC
Bacillus_Paramy ---------GACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGC
#################################################
790 800 810 820 830 840
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S GGCGACATCCGGGGGAACTACTGACGCTGAGGTGACTCTCCGTGCTGAACCTACCGGTGA
Aquifex_aeolicu GTAGATCTCGGGAGGAACACCGAAGGGGAAGCCAGCCTGCTGGGGCTGTCCTGACGGTCA
Vibrio_Harveyi GTAGAGATCTGAAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAGATACTGACACTCA
Pseudoalteromon GTAGAGATCTGAAGGAATACCGATGGCGAAGGCAGCCACCTGGGTCAACACTGACGCTCA
Shewanella_Alga GTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAAAGACTGACGCTCA
Streptomyces_sp GCAGATATCAGGAGGAACACCGGTGGCGAAGGCGGATCTCTGGGCCGATACTGACGCTGA
Micromonospora GCAGATATCAGGAGGAACACCGGTGGCGAAGGCGGGTCTCTGGGCCGATACTGACGCTGA
Tepidibacter_Fo GTAGATATTGGGAGGAACACCAGTTGCGAAGGCGGCTCTCTGGACTGTAACTGACGCTGA
Thermoactinomyc GTAGAGATCGGGAGGAACACCAGTGGCGAAGGCGGCTCTCTGGCCTGTAACTGACGCTGA
Laceyella_Sacch GTAGAGATCGGGAGGAACACCAGTGGCGAAGGCGGCTCTCTGGCCTGTTTCTGACGCTGA
Virgibacillus_S GTAGAGATGTGGAGGAACACCAGTGGCGAAGGCGACTCTCTGGTCTGTAACTGACGCTGA
Exiguobacterium GTAGAGATGTGGAGGAACACCAGTGGCGAAGGCGACTCTTTGGCCTATAACTGACGCTGA
Cytobacillus_Ko GTAGAGATTTGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACGCTGA
Bacillus_sp_CTA GTAGAGATGTGGAGGAACACCAGTGGCGAAGGCGGCTTTTTGGTCTGTAACTGACGCTGA
Bacillus_Cereus GTAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACACTGA
Bacillus_Paramy GTAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACACTGA
############################################################
850 860 870 880 890 900
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S AGATACCATGCGTGTGCACCGCACAAGATAAGACAACTAGCCAGTCCGATCCGTGAA---
Aquifex_aeolicu GGGACGAAAGCCGGGGGAGCAAACCGGATTAGATACCCGGGTAGTCCCGGCCGTAAACCA
Vibrio_Harveyi GATGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Pseudoalteromon TGTACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Shewanella_Alga GGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Streptomyces_sp GGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGG
Micromonospora GGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGT
Tepidibacter_Fo GGCACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Thermoactinomyc GGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Laceyella_Sacch GGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Virgibacillus_S GGTGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Exiguobacterium GGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Cytobacillus_Ko GGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Bacillus_sp_CTA GGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Bacillus_Cereus GGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
Bacillus_Paramy GGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA
#########################################################
910 920 930 940 950 960
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S -----------------------------ATCTTAGTGGTACATCTAAGGCGGTATCCCG
Aquifex_aeolicu TGGGCGCTAGGGCTTG------TCCCTCTGGGGCAGGCTCGCAGCTAACGCGTTA-AGCG
Vibrio_Harveyi TGTCTACTTGGAGGTTGTGG--CCTTGAGCCGTGGCTTTCGGAGCTAACGCGTTA-AGTA
Pseudoalteromon TGTCTACTAGGAGCTGGGGTCTTCGGACAACTT---TTCCAAAGCTAACGCATTA-AGTA
Shewanella_Alga TGTCTACTCGGAGTTTGGTG--TCTTGAACACTGGGCTCTCAAGCTAACGCATTA-AGTA
Streptomyces_sp TGGGCACTAGGTGTGGGCAACATTCCACGTTGTCCGTGCCGCAGCTAACGCATTA-AGTG
Micromonospora TGGGCGCTAGGTGTGGGGGGCCTCTCCGGTTCCCTGTGCCGCAGCTAACGCATTA-AGCG
Tepidibacter_Fo TGAGTGCTAGGTGTCGGGGGTTACCC---CCCTCGGTGCCGCAGCTAGCGCATTA-AGCA
Thermoactinomyc TGAGTGCTAGGTGTTGGGGGG-CTACGC-CCCTCAGTGCCGAAGGTAACCCATTA-AGCA
Laceyella_Sacch TGAGTGCTAGGTGTCGGGGGGTCCTA---CCCTCGGTGCCGAAGGTAACCCATTA-AGCA
Virgibacillus_S TGAGTGCTACGTGTTAGGGGGTTTCCGC-CCCTTAGTGCTGAAGTTAACGCATTA-AGCA
Exiguobacterium TGAGTGCTAGGTGTTGGAGGGTTTCCGC-CCTTCAGTGCTGAAGCTAACGCATTA-AGCA
Cytobacillus_Ko TGAGTGCTAAGTGTTAGAGGGTTTCCGC-CCTTTAGTGCTGCAGCAAACGCATTA-AGCA
Bacillus_sp_CTA TGAGTGCTAAGTGTTAGAGGGTTTCCGC-CCTTTAGTGCTGCAGCTAACGCATTA-AGCA
Bacillus_Cereus TGAGTGCTAAGTGTTAGAGGGTTTCCGC-CCTTTAGTGCTGAAGTTAACGCATTA-AGCA
Bacillus_Paramy TGAGTGCTAAGTGTTAGAGGGTTTCCGC-CCTTTAGTGCTGAAGTTAACGCATTA-AGCA
################### ####
970 980 990 1000 1010 1020
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S CACCTTCTGGGGAGTACTGACCGCATTAGTCAAAACTCCCATGGAAATGACGGGGCGCCA
Aquifex_aeolicu CCCCGCCTGGGGAGTAC-GGGCGCA--AGCCTGAAACTCAAAGGAATTGGCGGGGGCCCG
Vibrio_Harveyi GACCGCCTGGGGAGTAC-GGTCGCA--AGATTAAAACTCAAATGAATTGACGGGGGCCCG
Pseudoalteromon GACCGCCTGGGGAGTAC-GGCCGCA--AGGTTAAAACTCAAATGAATTGACGGGGGCCCG
Shewanella_Alga GACCGCCTGGGGAGTAC-GGCCGCA--AGGTTAAAACTCAAATGAATTGACGGGGGCCCG
Streptomyces_sp CCCCGCCTGGGGAGTAC-GGCCGCA--AGGCTAAAACTCAAAGGAATTGACGGGGGCCCG
Micromonospora CCCCGCCTGGGGAGTAC-GGCCGCA--AGGCTAAAACTCAAAGGAATTGACGGGGGCCCG
Tepidibacter_Fo CTCCGCCTGGGAAGTAC-GCTCGCA--AGAGTGAAACTCAAAGGAATTGACGGGGACCCG
Thermoactinomyc CTCCGCCTGGGGAGTAC-GGCCGCA--AGGCTGAAACTCAAAGGAATTGACGGGGGCCCG
Laceyella_Sacch CTCCGCCTGGGGAGTAC-GGCCGCA--AGGCTGAAACTCAAAGGAATTGACGGGGGCCCG
Virgibacillus_S CTCCGCCTGGGGAGTAC-GGCCGCA--AGGCTGAAACTCAAAAGAATTGACGGGGGCCCG
Exiguobacterium CTCCGCCTGGGGAGTAC-GGTCGCA--AGGCTGAAACTCAAAGGAATTGACGGGGACCCG
Cytobacillus_Ko CTCCGCCTGGGGAGTAC-GACCGCA--AGGTTGAAACTCAAAGGAATTGACGGGGGCCCG
Bacillus_sp_CTA CTCCGCCTGGGGAGTAC-GGTCGCA--AGACTGAAACTCAAAGGAATTGACGGGGGCCCG
Bacillus_Cereus CTCCGCCTGGGGAGTAC-GGCCGCA--AGGCTGAAACTCAAAGGAATTGACGGGGGCCCG
Bacillus_Paramy CTCCGCCTGGGGAGTAC-GGCCGCA--AGGCTGAAACTCAAAGGAATTGACGGGGGCCCG
################# #################################
1030 1040 1050 1060 1070 1080
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S CGGCATGAACCTCAGAAGCATGTGACTGTAAGTTCGAACAACGCGTAGAACCTGTACCTT
Aquifex_aeolicu CA----CAACCGGTGGAGCGTCTGGTT-CAATTCGATGCTAACCGAAGAACCT-TACCC-
Vibrio_Harveyi CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGATGCAACGCGAAGAACCT-TACCT-
Pseudoalteromon CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGATGCAACGCGAAGAACCT-TACCT-
Shewanella_Alga CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGATGCAACGCGAAGAACCT-TACCT-
Streptomyces_sp CA----CAAGCGGCGGAGCATGTGGCT-TAATTCGACGCAACGCGAAGAACCT-TACCA-
Micromonospora CA----CAAGCGGCGGAGCATGCGGAT-TAATTCGATGCAACGCGAAGAACCT-TACCT-
Tepidibacter_Fo CA----CAAGCAGCGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCT-
Thermoactinomyc CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCA-
Laceyella_Sacch CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGAAGCAACGCGAGGAACCT-TACCA-
Virgibacillus_S CA----CAAGCGGGGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCA-
Exiguobacterium CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCA-
Cytobacillus_Ko CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCA-
Bacillus_sp_CTA CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCA-
Bacillus_Cereus CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCA-
Bacillus_Paramy CA----CAAGCGGTGGAGCATGTGGTT-TAATTCGAAGCAACGCGAAGAACCT-TACCA-
## ##################### #########################
1090 1100 1110 1120 1130 1140
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S GGACTTCGACATCACCAGAACTATCCTTGACCATGGATTTGGT-CTC-----CCTCTGGA
Aquifex_aeolicu -GGGCTTGACATGCCGGGGAGACTCCG----CGAAAGCGGAGTTGTGGAAGTCCCTAGGA
Vibrio_Harveyi -ACTCTTGACAT-CCAGAGAACTTTC-----CAGAGATGGATTGGTG-----CCTTCGGG
Pseudoalteromon -ACACTTGACAT-ACAGAGAACTTAC-----CAGAGATGGTTTGGTG-----CCTTCGGG
Shewanella_Alga -ACTCTTGACAT-CCACAGAACTTTT-----CAGAGATGAATTGGTG-----CCTTCGGG
Streptomyces_sp -AGGCTTGACATACACCGGAAACATC-----CAGAGATGGGTGCC-------CCCTTGTG
Micromonospora -GGGTTTGACATGGCCGCAAAACTCG-----CAGAGATGTGAGGT-------CCTTCGGG
Tepidibacter_Fo -AGGCTTGACATCCCTTGGACCGCTT-----CTTAACCGAAGCTTTC-----CCTTTTGG
Thermoactinomyc -GGGCTTGACATCCCGCTGACCCCTC-----CAGAGATGGAGG-TTT-----CCTTCGGG
Laceyella_Sacch -GGGCTTGACATCCCGCTGACCGCTC-----CAGAGATGGAGC-TTC-----CCTTCGGG
Virgibacillus_S -GGTCTTGACAT-CCTCTGCCAATCC-----TAGAGATAGGATGTTC-----CCTTCCGG
Exiguobacterium -ACTCTTGACATCCCCCTGACCGGTA-----CAGAGATGTACCTTCC-----CCTTCGGG
Cytobacillus_Ko -GGTCTTGACAT-CCTCTGACAATCC-----TAGAGATAGGACTTTC-----CCCTTCGG
Bacillus_sp_CTA -GGTCTTGACAT-CCTCTGACAACTC-----TAGAGATAGAGCGTTC-----CCCTTCGG
Bacillus_Cereus -GGTCTTGACAT-CCTCTGACAACCC-----TAGAGATAGGGCTTCT-----CCTTCGGG
Bacillus_Paramy -GGTCTTGACAT-CCTCTGACAACCC-----TAGAGATAGGGCTTCT-----CCTTCGGG
########### ############# ########
1150 1160 1170 1180 1190 1200
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S CAATCCTGACCAAAAGAGCATGCATCGCCTTGTCGTCACGCTACGTGATCAGTGAGATGC
Aquifex_aeolicu CTTTCCCCCGGCACAGGTGGTGCATGGC--CGTCGTCA-GCT-CGTGTC--GTGAGATGT
Vibrio_Harveyi AACTCTGA---GACAGGTGCTGCATGGC--TGTCGTCA-GCT-CGTGTT--GTGAAATGT
Pseudoalteromon AGCTCTGA---TACAGGTGCTGCATGGC--TGTCGTCA-GCT-CGTGTT--GTGAGATGT
Shewanella_Alga AACTGTGA---GACAGGTGCTGCATGGC--TGTCGTCA-GCT-CGTGTT--GTGAAATGT
Streptomyces_sp GTCGGTG----TACAGGTGGTGCATGGC--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Micromonospora GGCGGT-----CACAGGTGGTGCATGGC--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Tepidibacter_Fo GACTGAGGT--GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Thermoactinomyc ACAGCGGT---GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Laceyella_Sacch GCAGCGGT---GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Virgibacillus_S GGA-CAGATT-GACAGGTGGTGCATGTT--TGTCGTCA-GCT-CCGGTC--CCGAGATGT
Exiguobacterium GGCAGGGGT--GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Cytobacillus_Ko GGGACAGAGT-GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Bacillus_sp_CTA GGGACAGAGT-GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Bacillus_Cereus AGCAGAGT---GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
Bacillus_Paramy AGCAGAGT---GACAGGTGGTGCATGGT--TGTCGTCA-GCT-CGTGTC--GTGAGATGT
### ################# #########
1210 1220 1230 1240 1250 1260
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S ATGGNTGAACGTTCCCGCTACCGGACNCGAACCTGTGTCCTTAGTT-ACCGACA------
Aquifex_aeolicu TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-CTGCCCCCAGTT-GCTACCC------
Vibrio_Harveyi TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTATCCTTGTTT-GCCAGCA------
Pseudoalteromon TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-CTATCCTTAGTT-GCCAGCG------
Shewanella_Alga TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-CTATCCTTACTT-GCCAGCG------
Streptomyces_sp TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTGTCCCGTGTT-GCCAGCAGGCCCT
Micromonospora TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TCGTTCGATGTTGGCCAGCG------
Tepidibacter_Fo TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTACCTTTAGTT-GCCAGCA------
Thermoactinomyc TGGGTTCAG---TCCCGC-AACGAGCGCAACCC-TTGTCGTTAGTT-GCCAGCA------
Laceyella_Sacch TGGGTTCAG---TCCCGC-GACGAGCGCAACCC-TTATCGCTAGTT-GCCAGCA------
Virgibacillus_S TGGGTTAGG---TCCCGC-AACGAGGGCAACCCTTTGATCTTAGTT-GCCAGCA------
Exiguobacterium TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTGTCCTTAGTT-GCCAGCA------
Cytobacillus_Ko TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTGATCTTAGTT-GCCAGCA------
Bacillus_sp_CTA TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTGATCTTAGTT-GCCAGCA------
Bacillus_Cereus TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTGATCTTAGTT-GCCATCA------
Bacillus_Paramy TGGGTTAAG---TCCCGC-AACGAGCGCAACCC-TTGATCTTAGTT-GCCATCA------
######### ############## ############
1270 1280 1290 1300 1310 1320
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S --------------------------------CGATCACGAGTCGC--------------
Aquifex_aeolicu -CGTTTGGGGAGCACT-CTG-GGGGGACC-GCCGGCGATAAGCCGG--AGGAA--GGGGG
Vibrio_Harveyi CTTTCGGGTGGGAACT-CCAGGGGAGACTGCCCGGTGATAAACCGGGAAGGAA--GGTGG
Pseudoalteromon -ATTCGGTCGGGAACT-CTA-AGGAGACT-GCCGGTGATAAACCGG--AGGAA--GGTGG
Shewanella_Alga GGTAATGCCGGGAACT-TTA-GGGAGACT-GCCGGTGATAAACCGG--AGGAA--GGTGG
Streptomyces_sp TGTGGTGCTGGGGACT--CACGGGAGACC-GCCGGGGTCAACTCGG--AGGAA--GGTGG
Micromonospora CGTAATGGCGGGGACT--CATCGAAGACT-GCCGGGGTCAACTCGG--AGGAA--GGTGG
Tepidibacter_Fo -TTTCGGATGGGCACT-CTA-GAGGGACT-GCCGAGGATAACTCGG--AGGAA--GGTGG
Thermoactinomyc -TTTCGGATGGGCACT-CTA-ACGAGACA-GCCGGTGA-AAGCTGG--AGGAA--GGTGG
Laceyella_Sacch --TTCAGTTGGGCACT-CTA-GCGAGACA-GCCGGTGA-AAGCCGG--AGGAA--GGTGG
Virgibacillus_S --TTTAGTTGGGCCCTCCTA-AGGTGACTGGCCGGTGACAAACCGG--AAGGACGGGTGG
Exiguobacterium --TTTGGTTGGGCACT-CTA-GGGAGACT-GCCGGTGACAAACCGG--AGGAA--GGTGG
Cytobacillus_Ko --TTCAGTTGGGCACT-CTA-AGGTGACT-GCCGGTGACAAACCGG--AGGAA--GGTGG
Bacillus_sp_CTA --TTTAGTTGGGCACT-CTA-AGGTGACT-GCCGGTGACAAACCGG--AGGAA--GGTGG
Bacillus_Cereus --TTAAGTTGGGCACT-CTA-AGGTGACT-GCCGGTGACAAACCCG--GAGAA--GGTGG
Bacillus_Paramy --TTTAGTTGGGCACT-CTA-AGGTGACT-GCCGGTGACAAACCGG--AGGAA--GGTGG
1330 1340 1350 1360 1370 1380
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S --------------------TTGCTCTTA-------------------------------
Aquifex_aeolicu GGATG-ACGTCAGGTCAGTAT-GCCCTTT-ATGCCCG-GGGCCACACAGG-CGCTACAGT
Vibrio_Harveyi GGACGAACGTCAAGTCATCATGGGCCCTT-ACGAGGTAGGGCTACACACGTTGCTACAAT
Pseudoalteromon GGACG-ACGTCAAGTCATCAT-GGCCCTT-ACGTGTA-GGGCTACACACG-TGCTACAAT
Shewanella_Alga GGACG-ACGTCAAGTCATCAT-GGCCCTT-ACGAGTA-GGGCTACACACG-TGCTACAAT
Streptomyces_sp GGACG-ACGTCAAGTCATCAT-GCCCCTT-ATGTCTT-GGGCTGCACACG-TGCTACAAT
Micromonospora GGATG-AGGTCAAGTCATCAT-GCCCCTT-ATGTCCA-GGGCTTCACGCA-TGCTACAAT
Tepidibacter_Fo GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGCTTA-GGGCTACACACG-TGCTACAAT
Thermoactinomyc GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGTCCT-GGGCTACACACG-TGCTACAAT
Laceyella_Sacch GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGTCCT-GGGCTACACACG-TGCTACAAT
Virgibacillus_S GGATG-ACGTCAAATCATCAT-GCCCCCTAATGACCTGGGGCTAGCAACGTTGCTACAAT
Exiguobacterium GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGAGTT-GGGCTACACACG-TGCTACAAT
Cytobacillus_Ko GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGACCT-GGGCTACACACG-TGCTACAAT
Bacillus_sp_CTA GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGACCT-GGGCTACACACG-TGCTACAAT
Bacillus_Cereus GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGACCT-GGGCTACCAACG-TGCTACAAT
Bacillus_Paramy GGATG-ACGTCAAATCATCAT-GCCCCTT-ATGACCT-GGGCTACACACG-TGCTACAAT
1390 1400 1410 1420 1430 1440
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S -GGTGA------------------------CTGCA-----GTGGA---------------
Aquifex_aeolicu -GGCCG-GGA--CAATGGG--ATGCGA---CCCCGTAAG-GGGGA-GCTAATCCC----T
Vibrio_Harveyi -GGGCGCATA--CAGAGGGGCCGGCCAACTTTGCG--AGAGTGGA-GCGAATCCC---AA
Pseudoalteromon -GGCAG-GTA--CAGAGAG--CAGCGAGC-TAGCGATAG---TGA-GCGAATCCC---TT
Shewanella_Alga -GGTCA-GTA--CAGAGGG--TTGCGAAG-CCGCG--AG-GTGGA-GCTAATCCC---AT
Streptomyces_sp -GGCCG-GTA--CAATGAG--CTGCGATA-CCGTG--AG-GTGGA-GCGAATCTC---AA
Micromonospora -GGCCG-GTA--CAATGGG--CTGCGATA-CCGTG--AG-GTGGA-GCGAATCCC---AA
Tepidibacter_Fo -GGCTA-GTA--CAGAGGG--TTGCAAAG-CCGCG--AG-GCCAA-GCTAATCCC---TT
Thermoactinomyc -GGCTG-GTA--CAAAGGG--CAGCGAAC-CCGCG--AG-GGGGA-GCCAATCCC---AA
Laceyella_Sacch -GGCCG-GTA--CAATGGG--TCGCCAAC-CCGCG--AG-GGGGA-GCTAATCCC---AC
Virgibacillus_S GGGATG-GCAATCAAGGGC--GAGCGAAA-CCCCGGAAG-GTCAAGGCAAATCCCTTTAA
Exiguobacterium -GGACG-GTA--CAAAGGG--CAGCGAAG-CCGCG--AG-GTGGA-GCCAATCCC---AG
Cytobacillus_Ko -GGATG-GTA--CAAAGGG--CTGCAAGA-CCGCG--AG-GTTTA-GCCAATCCC---AT
Bacillus_sp_CTA -GGATG-GTA--CAAAGGG--CTGCAAGA-CCGCG--AG-GTCAA-GCCAATCCC---AT
Bacillus_Cereus -GGACG-GTA--CAAAGAG--CTGCAAAA-CCGCG--AG-GGGGA-GCTAATCCC---AA
Bacillus_Paramy -GGACG-GTA--CAAAGAG--CTGCAAGA-CCGCG--AG-GTGGA-GCTAATCTC---AT
1450 1460 1470 1480 1490 1500
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S ----------CTTAG---------------------------------------------
Aquifex_aeolicu AAACC-CGGTCATGG-TGC--GGATTGG-GGGCTGAAACTCGC-CC--CCATG-AAGCC-
Vibrio_Harveyi AAAGTGCGGTCGTAG-TCCCGGGATCGG-AGTCTGCAACTCGA-CTCGCCGTG-AAGTC-
Pseudoalteromon AAAGC-CTGTCGTAG-TCC--GGATTGG-AGTCTGCAACTCGA-CT--CCATG-AAGTC-
Shewanella_Alga AAAGC-TGGTCGTAG-TCC--GGATTGG-AGTCTGCAACTCGA-CT--CCATG-AAGTC-
Streptomyces_sp AAAGC-CGGTCTCAG-TTC--GGATTGG-GGTCTGCAACTCGA-CC--CCATG-AAGTC-
Micromonospora AAAGC-CGGTCTCAG-TTC--GGATCGG-GGTCTGCAACTCGA-CC--CCGTG-AAGTC-
Tepidibacter_Fo AAAGC-TAGTCTCAG-TTC--GGTTTGC-AGGCTGAAACTCGC-CT--GCATG-AAGCT-
Thermoactinomyc AAAGC-CAGTCTCAG-TTC--GGATCGC-AGGCTGCAACTCGC-CT--GCGTG-AAGCC-
Laceyella_Sacch AAAAC-CGGTCTCAG-TTC--GGATCGC-AGGCTGCAACTCGC-CT--GCGTG-AAGCC-
Virgibacillus_S AAACC-ATTTCTCAGTTTC--GGATTGGAAGGTTGTAACTCCCGCT--GCATAAAAAGCG
Exiguobacterium AAAGC-CGTTCTCAG-TTC--GGATTGC-AGGCTGCAACTCGC-CT--GCATG-AAGTC-
Cytobacillus_Ko AAAAC-CATTCTCAG-TTC--GGATTGT-AGGCTGCAACTCGC-CT--ACATG-AAGCC-
Bacillus_sp_CTA AAAAC-CATTCTCAG-TTC--GGATTGT-AGGCTGCAACTCGC-CT--ACATG-AAGCT-
Bacillus_Cereus AAAAC-CGTTTCCAT-TCC--GGATTGG-AGGCTGCAACTCCC-CC--AACTGAAAGCTG
Bacillus_Paramy AAAAC-CGTTCTCAG-TTC--GGATTGT-AGGCTGCAACTCGC-CT--ACATG-AAGCT-
1510 1520 1530 1540 1550 1560
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S -----------------------------------------------------CCCGACG
Aquifex_aeolicu GGAATCGGTAGTAACGGGGT--ATCAGCGATG--TCCCCGTG-AATACGTT--CTCGGGC
Vibrio_Harveyi GGAATCGCTAGTAATCGTGG--ATCAGA-ATG--CCACGGTGAAATACGTT--CCCGGGC
Pseudoalteromon GGAATCGCTAGTAATCGCAA--ATCAGA-ATG--TTGCGGTG-AATACGTT--CCCGGGC
Shewanella_Alga GGAATCGCTAGTAATCGTGG--ATCAGA-ATG--CCACGGTG-AATACGTT--CCCGGGC
Streptomyces_sp GGAGTCGCTAGTAATCGCAG--ATCAGCATTG--CTGCGGTG-AATACGTT--CCCGGGC
Micromonospora GGAGTCGCTAGTAATCGCAG--ATCAGCAACG--CTGCGGTG-AATACGTT--CCCGGGC
Tepidibacter_Fo GGAGTTGCTAGTAATCGCGA--ATCAGA-ATG--TCGTGGTG-AATGCGTT--CCCGGGT
Thermoactinomyc GGAATCGCTAGTAATCGCGG--ATCAGC-ATG--CCGCGGTG-AATACGTT--CCCGGGC
Laceyella_Sacch GGAATCGCTAGTAATCGCGG--ATCAGC-ATG--CCGCGGTG-AATACGTT--CCCGGGC
Virgibacillus_S GGAATTCTTTTTAATCCCGGGAAACAAA-TTTCCCCCCGGGG-AAAAACTTTCCCCGGGC
Exiguobacterium GGAATCGCTAGTAATCGCAG--GTCAGC-ATA--CTGCGGTG-AATACGTT--CCCGGGT
Cytobacillus_Ko GGAATCGCTAGTAATCGCGG--ATCAGC-ATG--CCGCGGTG-AATACGTT--CCCGGGC
Bacillus_sp_CTA GGAATCGCTAGTAATCGCGG--ATCAGC-ATG--CCGCGGTG-AATACGTT--CCCGGGC
Bacillus_Cereus GGAATCCCTTGAAATCCCGG--AAACCC-ATGGCCCGCGG-A-AACACTTT--CCCGGGC
Bacillus_Paramy GGAATCGCTAGTAATCGCGG--ATCAGC-ATG--CCGCGGTG-AATACGTT--CCCGGGC
#######
1570 1580 1590 1600 1610 1620
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S CTAGN-GGACAGTGCACGT-CAGATCTCGAG-----------------------------
Aquifex_aeolicu CTTGC-ACACACCGCCCGT-CACGCCACGGAA--GTCGG--TCCGGCCGGAAGTCCCCGA
Vibrio_Harveyi CTTGT-ACACACCGCCCGT-CACACCATGGGA-TGTGGG--CTGCAAAAGAAGTAGGTAG
Pseudoalteromon CTTGT-ACACACCGCCCGT-CACACCATGGGA--GTGGG--TTGCTCCAGAAGTGGATAG
Shewanella_Alga CTTGT-ACACACCGCCCGT-CACACCATGGGA--GTGGG--CTGCACCAGAAGTAGATAG
Streptomyces_sp CTTGT-ACACACCGCCCGT-CACGTCACGAAA--GTCGG--TAACACCCGAAGCCGG---
Micromonospora CTTGT-ACACACCGCCCGT-CACGTCACGAAA--GTCGG--CAA----------------
Tepidibacter_Fo CTTGT-ACACACCGCCCGT-CACACCATGGGA--GTCGG--GGGCGCCCGAAGTCGGGTA
Thermoactinomyc CTTGT-ACACACCGCCCGT-CACACCACGAGA--GTTTG--CAACACCCGAAGTCGGTGA
Laceyella_Sacch CTTGT-ACACACCGCCCGT-CACACCACGAGA--GTTTG--CAACACCCGAAGTCGGTGA
Virgibacillus_S CTGGTGAAACCCCGCCCGT-TCCACCCCGAAAATGTTTGGTTAACCCCAAAATTTGGGAG
Exiguobacterium CTTGT-ACACACCGCCCGT-CACACCACGAGA--GTTTG--CAACACCCGAAGTCGGTGA
Cytobacillus_Ko CTTGT-ACACACCGCCCGT-CACACCACGAGA--GTTTG--TAACACCCGAAGTCGGTGG
Bacillus_sp_CTA CTTGT-ACACACCGCCCGT-CACACCACGAGA--GTTTG--TAACACCCGAAGTC-----
Bacillus_Cereus TTTTT-A-ACCCCGCCCGCGCACTCCCCAAAG--GTTTG----ACCCCCAGACTCGGCGG
Bacillus_Paramy CTTGT-ACACACCGCCCGT-CACACCACGAGA--GTTTG--TAACACCCGAAGTCGGTGG
##### ###########
1630 1640 1650 1660 1670 1680
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S ------------------------------------------------------------
Aquifex_aeolicu GCTAACCGGCTCCTTCGGGAGCCGGAGGCAGGGG--CCGATGGCCGGGCCGGCGACTGGG
Vibrio_Harveyi TTTAAC---CTTCGG--------GAGGACG-CTA---CCACT---TGGTCCATGGG----
Pseudoalteromon TCTAAC------------------------------CTTAGGGGGGACGTCACCAC----
Shewanella_Alga CTTAAC---CTT-----------CGGGAGGGCGTTTACCACGGTGTGGTTCATGACTGGG
Streptomyces_sp ------------------------------------------------------------
Micromonospora ------------------------------------------------------------
Tepidibacter_Fo TCCAAC------------CACTAGGAGGAACCCG--CCGAAGGTGAAATCGATGACTGGG
Thermoactinomyc GGCAAC---CTTTTA--------GGAGCCAGCCG--CCGAAGGTGGGGCAGATGATTGGG
Laceyella_Sacch GGTAAC---CTTTT---------GGAACCAGCCG--CCGAAGGTGGGGCAGATGATTGGG
Virgibacillus_S GGAAACTTTTTTTT---------GGGACCACCCGCCCCGATAGGGGGCATCGCCATTGGG
Exiguobacterium GGTGAC------------CGTAAGGAGCCAGCCG--CCGAAGGTGGGGCAGATGATTGGG
Cytobacillus_Ko GGTAAC---CTTT----------GGAGCCAGCCG--CCTAAGGTGGACAG----------
Bacillus_sp_CTA ------------------------------------------------------------
Bacillus_Cereus GG-AAC---CTTTT---------GGACC---CCC--CCTCAAGGGGGCAATGGTTGCGGC
Bacillus_Paramy GGTAAC---CTTTT---------GGAGCCAGCCG--CCTAAGGTGGACAG----------
1690 1700 1710 1720 1730 1740
=========+=========+=========+=========+=========+=========+
Stutzerimonas_S ------------------------------------------------------------
Aquifex_aeolicu GCGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTT------
Vibrio_Harveyi ---------------GGTAG--GGGTGCT-------------------------------
Pseudoalteromon --------------GAGTAATCGGTTCCT-------------------------------
Shewanella_Alga GTGAAGTCGTAACAAGGTAACCAAT-----------------------------------
Streptomyces_sp ------------------------------------------------------------
Micromonospora ------------------------------------------------------------
Tepidibacter_Fo GTGAAGTCGTAACAAGGTAACCAAT-----------------------------------
Thermoactinomyc GTGAAGTCGTAACAAGGTAACCAAT-----------------------------------
Laceyella_Sacch GTGAAGTCGTAACAAGGTAACCAAT-----------------------------------
Virgibacillus_S ATTTGGAAGGTTTCAAACAATTTTTGAAATCAACCCAAAAAAATTGGGGCCTTTTGTTTC
Exiguobacterium GTGAAGTCGTAACAAGGTAACCAAT-----------------------------------
Cytobacillus_Ko ------------------------------------------------------------
Bacillus_sp_CTA ------------------------------------------------------------
Bacillus_Cereus CGGGGTTTAAAAGAAAGTAACATAACACAATTGGGGGGAGAGATGGAGTGGGGTA-----
Bacillus_Paramy ------------------------------------------------------------
1750 1760
=========+=========+=======
Stutzerimonas_S ---------------------------
Aquifex_aeolicu ---------------------------
Vibrio_Harveyi ---------------------------
Pseudoalteromon ---------------------------
Shewanella_Alga ---------------------------
Streptomyces_sp ---------------------------
Micromonospora ---------------------------
Tepidibacter_Fo ---------------------------
Thermoactinomyc ---------------------------
Laceyella_Sacch ---------------------------
Virgibacillus_S GATCCTTTTCCTTACTTACTTTTTTCC
Exiguobacterium ---------------------------
Cytobacillus_Ko ---------------------------
Bacillus_sp_CTA ---------------------------
Bacillus_Cereus ---------------------------
Bacillus_Paramy ---------------------------
Parameters used Minimum Number Of Sequences For A Conserved Position: 9 Minimum Number Of Sequences For A Flanking Position: 14 Maximum Number Of Contiguous Nonconserved Positions: 8 Minimum Length Of A Block: 10 Allowed Gap Positions: None
Flank positions of the 22 selected block(s) Flanks: [184 200] [265 278] [280 319] [321 500] [531 572] [574 680] [683 697] [732 897] [937 955] [957 977] [988 1022] [1027 1047] [1049 1073] [1082 1092] [1094 1106] [1133 1143] [1152 1168] [1192 1209] [1220 1233] [1235 1246] [1554 1565] [1569 1579] New number of positions in input.fasta-gb: 821 (46% of the original 1767 positions)