oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo --- PhyML v3.0 --- A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood Stephane Guindon & Olivier Gascuel http://atgc.lirmm.fr/phyml Copyright CNRS - Universite Montpellier II oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo . Sequence file : phymlrKzvs0Vu/input.phy . Data set : #1 . Tree search : NNIs. Initial tree : BIONJ . Model of nucleotides substitution : HKY85 . Number of taxa : 6 . Log-likelihood : -5913.44986 . Discrete gamma model : Yes - Number of categories : 4 - Gamma shape parameter : 2.378 . Proportion of invariant : 0.428 . Transition/transversion ratio : 3.133 . Nucleotides frequencies : - f(A)= 0.27903 - f(C)= 0.19768 - f(G)= 0.23244 - f(T)= 0.29085 . Time used 0h0m3s oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo