Phylogeny.fr: "One Click" Mode

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"One Click" Mode

Alignment
MUSCLE

Curation
Gblocks

Phylogeny
PhyML

Tree Rendering
TreeDyn

Help

Alignment results

Figure 1: Sequence alignment.
Legend:
Similar residues are colored as the most conserved one (according to BLOSUM62).
Average BLOSUM62 score: Max: 3.0 Mid: 1.5 Low: 0.5

Input:

Sequences

Outputs:

Alignment in Fasta format

Alignment in Phylip format

Alignment in Clustal format

Taxon names association table

Download taxon names association table

Multiple sequence alignment editor:

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(If you expect to edit the alignment by yourself, you can consult Jalview multiple alignment editor documentation doc

Please cite:

Dereeper A., Audic S., Claverie J.M., Blanc G. BLAST-EXPLORER helps you building datasets for phylogenetic analysis. BMC Evol Biol. 2010 Jan 12;10:8. (PubMed)
Dereeper A.*, Guignon V.*, Blanc G., Audic S., Buffet S., Chevenet F., Dufayard J.F., Guindon S., Lefort V., Lescot M., Claverie J.M., Gascuel O. Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W465-9. Epub 2008 Apr 19. (PubMed) *: joint first authors
Edgar RC. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 2004, Mar 19;32(5):1792-7. (PubMed)

Centre
National
de la
Recherche
Scientifique

Output Taxon Name	Original (Long) Taxon Name

B1M6P5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	B1M6P5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
B1M6P5.1_1	B1M6P5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Clustal, PHYLIP, HTML)
B1M6P5.1_146-359_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	B1M6P5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
B2IGL6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	B2IGL6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
B2IGL6.1_1	B2IGL6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(HTML, PHYLIP, Clustal)
B2IGL6.1_146-359_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	B2IGL6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
B3Q5X1.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	B3Q5X1.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
B3Q5X1.1_1	B3Q5X1.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Clustal, PHYLIP, HTML)
B3Q5X1.1_146-359_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	B3Q5X1.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
B6IPK0.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	B6IPK0.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
B6IPK0.1_1	B6IPK0.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Clustal, PHYLIP, HTML)
B6IPK0.1_144-358_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	B6IPK0.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
B6JCK5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	B6JCK5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
B6JCK5.1_1	B6JCK5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(HTML, Clustal, PHYLIP)
B6JCK5.1_146-359_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	B6JCK5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
B8ESQ6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	B8ESQ6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
B8ESQ6.1_1	B8ESQ6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(HTML, Clustal, PHYLIP)
B8ESQ6.1_146-359_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	B8ESQ6.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
Q13ET5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	Q13ET5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
Q13ET5.1_1	Q13ET5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Clustal, PHYLIP, HTML)
Q13ET5.1_146-359_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	Q13ET5.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
Q21C64.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	Q21C64.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
Q21C64.1_1	Q21C64.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(HTML, PHYLIP, Clustal)
Q21C64.1_146-359_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	Q21C64.1:146-359_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
Q2RNH8.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	Q2RNH8.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
Q2RNH8.1_1	Q2RNH8.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(HTML, Clustal, PHYLIP)
Q2RNH8.1_144-358_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	Q2RNH8.1:144-358_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)
Q4FNH5.1:144-355_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	Q4FNH5.1:144-355_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(FASTA)
Q4FNH5.1_1	Q4FNH5.1:144-355_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(PHYLIP, Clustal, HTML)
Q4FNH5.1_144-355_RecName_Full=Phenylalanine--tRNA_ligase_alpha_s	Q4FNH5.1:144-355_RecName:_Full=Phenylalanine--tRNA_ligase_alpha_subunit;_AltNam	(Guide tree)