PhyML 3.1/3.0 aLRT (doc + aLRT)

Datatype: auto-select       protein       DNA/RNA

Upload your alignment (FASTA, Phylip, Clustal, EMBL or NEXUS format) from a file:

Or paste it here (load example of alignment)

Maximum dataset size: (number of taxa) * (number of taxa) * (sequence size) = 80000000.


Statistical tests for branch support:
Approximate Likelihood-Ratio Test (aLRT):   
Bootstrapping procedure:    Number of bootstraps:   

Substitution model:   

Advanced Settings...

Number of substitution rate categories:
Gamma distribution parameter: estimated     fixed:    
Proportion of invariable sites: estimated     fixed:    
Transition / transversion ratio (nucleic acids only): estimated     fixed:    
Remove gaps from alignment    

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