T-Coffee 11.00.8cbe486 (doc)




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Maximum number of sequences is 50 for proteins and 50 for nucleic acids.
Maximum length of sequences is 2000 for protein and 2000 for nucleic acids.


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Pairwise methods: Pairwise alignment methods will be used to make a pairwise alignment of all the possible pairs of sequences.
Lalign_pair: 10 best local alignments
Slow_pair: accurate global alignment
Fast_pair: fast heuristic global alignment
Clustalw_pair: ClustalW pairwise alignment
Mlalign_id_pair Mclustalw_pair Mfast_pair Mslow_pair

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GCG / MSF
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Pir Sequences (unaligned)
Score in ASCII format (text)


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